halophFGD

Basic Information

Locus ID: Ah017810

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_481_HRSCAF_623	97622714	97623433	-	Ah017810

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.82	12,337.11 Da	49.00	88.84	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd01098	PAN_AP_plant	1	65	3.73788E-20	-
Pfam	PF08276	PAN-like domain	2	50	2.4E-13	IPR003609
ProSiteProfiles	PS50948	PAN/Apple domain profile.	1	65	7.670641	IPR003609

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G11330.3	-
RefSeq	XP_021846791.1	uncharacterized protein LOC110786543 [Spinacia oleracea]
Swiss-Prot	Q9SXB8	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3
TrEMBL	A0A803LL20	Receptor-like serine/threonine-protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah017810
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.8AG0003520