halophFGD

Basic Information

Locus ID: Ah017725

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_481_HRSCAF_623	96521017	96522923	-	Ah017725

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.34	21,809.70 Da	24.56	91.45	-0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	2	143	1.9E-29	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	3	139	1.6E-46	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	191	1.5E-48	-
SMART	SM00220	serkin_6	1	188	5.2E-5	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	193	26.788889	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	55	67	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23180.2	-
RefSeq	XP_021726246.1	cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa]
Swiss-Prot	Q8GYA4	Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3
TrEMBL	A0A803LKW0	Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah017725
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg25971
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000012040, gene:ENSEOMG00000033327 ... gene:ENSEOMG00000046916
Poaceae	Sporobolus alterniflorus	1	Chr26G016300
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-21987, nbisL1-mrna-23878