Basic Information
Locus ID:
Ah017687
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 96051872 | 96053745 | + | Ah017687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 34,285.33 Da | 38.25 | 97.41 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 185 | 1.2E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 280 | 2.16E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 61 | 287 | 4.2E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 60 | 1.9E-19 | - |
| SMART | SM00220 | serkin_6 | 2 | 217 | 5.0E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 281 | 31.000822 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 106 | 118 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021746898.1 | cysteine-rich receptor-like protein kinase 25 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803N951 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah017687 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg49776, Sbi_jg49781 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1487 |