Basic Information
Locus ID:
Ah017648
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 95593180 | 95598068 | + | Ah017648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 27,280.33 Da | 29.40 | 78.33 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 61 | 1.0E-9 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 96 | 9.518733 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 194 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021733422.1 | uncharacterized protein LOC110700222 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MT25 | CCHC-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg21673 |
| Amaranthaceae | Atriplex hortensis | 6 | Ah001861, Ah017648, Ah030750, Ah031846, Ah031859, Ah039403 |
| Amaranthaceae | Salicornia bigelovii | 26 | Sbi_jg12779, Sbi_jg15929, Sbi_jg21414, Sbi_jg22691 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg3700, Seu_jg3701 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl53448, Sgl58710 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000046401 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112232 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G20980.1, AT3G21000.1 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g18980.v2.2, Sp3g19000.v2.2 |
| Brassicaceae | Brassica nigra | 10 | BniB01g028750.2N, BniB01g042720.2N, BniB05g058560.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0702 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4280 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0529820 |
| Poaceae | Oryza coarctata | 1 | Oco24G009900 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G274800 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29840 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9792 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-22576, nbisL1-mrna-22910, nbisL1-mrna-2476 |
| Solanaceae | Lycium barbarum | 8 | gene-LOC132601344, gene-LOC132601735, gene-LOC132607958 ... |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107001288, gene-LOC107006700 |