Basic Information
Locus ID:
Ah017635
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 95440226 | 95470419 | + | Ah017635 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 150,888.34 Da | 48.26 | 80.83 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 371 | 607 | 1.53734E-85 | - |
| Pfam | PF00314 | Thaumatin family | 33 | 243 | 2.5E-38 | IPR001938 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 564 | 4.4E-46 | IPR001245 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 27 | 244 | 6.54E-36 | IPR037176 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 1165 | 1235 | 1.37E-6 | IPR038765 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 598 | 5.13E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 440 | 5.9E-37 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 244 | 7.5E-40 | IPR037176 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 1131 | 1256 | 4.0E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 617 | 6.1E-50 | - |
| SMART | SM00220 | serkin_6 | 365 | 618 | 1.0E-31 | IPR000719 |
| SMART | SM00205 | tha2 | 29 | 243 | 2.3E-15 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 245 | 20.491129 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 619 | 38.322235 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 486 | 498 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 371 | 393 | - | IPR017441 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 89 | 118 | 1.1E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 127 | 143 | 1.1E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 28 | 40 | 1.1E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 77 | 88 | 1.1E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 233 | 242 | 1.1E-9 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1058 | 1074 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1295 | 1355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1309 | 1355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 962 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1052 | 1080 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 970 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23140.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6. Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021719634.1 | cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M241 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.