Basic Information
Locus ID:
Ah017455
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 93350391 | 93358919 | - | Ah017455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 78,364.85 Da | 42.07 | 88.19 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 422 | 693 | 1.76186E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 690 | 3.2E-44 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 176 | 197 | 0.52 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 5.1E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 162 | 1.0E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 690 | 1.18E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 245 | 6.24E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 260 | 6.7E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 714 | 1.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 493 | 1.3E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 693 | 37.983017 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 105 | 126 | 7.365424 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 361 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021766831.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Chenopodium quinoa] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZD9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology