Basic Information
Locus ID:
Ah017227
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 89956288 | 89962902 | - | Ah017227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 89,743.22 Da | 40.19 | 92.39 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 7.9E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 636 | 719 | 2.4E-15 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 305 | 1.55E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 275 | 400 | 2.99E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 609 | 722 | 2.25E-27 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 413 | 2.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 708 | 8.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 5.7E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 274 | 2.5E-15 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 633 | 824 | 15.792639 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 639 | 661 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021730398.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1G4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology