Basic Information
Locus ID:
Ah017050
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 86509868 | 86516140 | - | Ah017050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 75,937.99 Da | 45.73 | 92.19 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 85 | 4.4E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 531 | 2.0E-10 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 172 | 1.7E-11 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 650 | 4.6E-31 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 193 | 1.1E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 219 | 9.9E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 540 | 6.0E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 470 | 1.0E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 544 | 658 | 4.1E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 655 | 15.382752 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021766121.1 | protein MALE DISCOVERER 1-like [Chenopodium quinoa] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME01 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology