Basic Information
Locus ID:
Ah017029
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 85801107 | 85808899 | - | Ah017029 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 69,005.55 Da | 40.05 | 95.74 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 299 | 567 | 1.1E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 155 | 3.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 3.0E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 193 | 3.33E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 570 | 8.92E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 373 | 579 | 1.8E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 212 | 1.3E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 372 | 7.1E-35 | - |
| SMART | SM00220 | serkin_6 | 297 | 572 | 2.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 572 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021724092.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Chenopodium quinoa] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME10 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology