Basic Information
Locus ID:
Ah016730
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 76374484 | 76377299 | - | Ah016730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 17,485.74 Da | 54.61 | 94.40 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 80 | 141 | 5.9E-11 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 54 | 144 | 2.44E-11 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 37 | 151 | 2.7E-14 | IPR036961 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 1 | 159 | 13.562086 | IPR001752 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10180.2 | - | 0 |
| RefSeq | XP_009599900.1 | kinesin-like protein KIN-7O [Nicotiana tomentosiformis] | 0 |
| B9G3M6 | Kinesin-like protein KIN-7I OS=Oryza sativa subsp. japonica OX=39947 GN=KIN7I PE=2 SV=2 | 0 | |
| TrEMBL | A0A1S3B985 | centromere-associated protein E OS=Cucumis melo OX=3656 GN=LOC103487168 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah016730, Ah024460, Ah032669 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g21410.v2.2 |
| Poaceae | Zea mays | 1 | Zm00001eb195540_P001 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13223 |