Basic Information
Locus ID:
Ah016422
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 61544945 | 61567216 | + | Ah016422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 109,614.02 Da | 46.04 | 85.05 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 214 | 275 | 7.34374E-4 | - |
| CDD | cd02674 | Peptidase_C19R | 781 | 954 | 5.50518E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 366 | 953 | 8.6E-86 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 90 | 192 | 9.7E-23 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 66 | 192 | 1.02E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 364 | 955 | 1.77E-107 | IPR038765 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 214 | 285 | 2.2E-6 | IPR029071 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 349 | 592 | 3.1E-66 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 745 | 963 | 1.6E-55 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 291 | 1.7E-11 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 60 | 204 | 4.1E-36 | - |
| SMART | SM00695 | dusp | 86 | 194 | 4.2E-28 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 366 | 956 | 56.468647 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 67 | 191 | 18.40126 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 898 | 915 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 367 | 382 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 355 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_021724802.1 | ubiquitin carboxyl-terminal hydrolase 5-like [Chenopodium quinoa] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MRX8 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology