Basic Information
Locus ID:
Ah016390
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 58439478 | 58443896 | + | Ah016390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.88 | 20,458.00 Da | 42.23 | 93.58 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 42 | 173 | 3.3E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 173 | 1.42E-25 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 121 | 6.8E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 176 | 17.262573 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 72 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18710.2 | Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. | 0 |
| RefSeq | XP_021772003.1 | shaggy-related protein kinase eta [Chenopodium quinoa] | 0 |
| Q60EZ2 | Shaggy-related protein kinase GSK2 OS=Oryza sativa subsp. japonica OX=39947 GN=GSK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME09 | non-specific serine/threonine protein kinase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah016390, Ah033370 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg36297, Sbi_jg36299 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl01217 |
| Brassicaceae | Brassica nigra | 1 | BniB07g029680.2N |
| Poaceae | Oryza coarctata | 2 | Oco06G029160, Oco23G009390 |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G1045700, Tel2E01G622000, Tel3E01G579800 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG005820, gene_TRIDC7AG067580 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34434 |