Basic Information
Locus ID:
Ah016053
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 40327750 | 40330121 | + | Ah016053 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 24,374.04 Da | 56.14 | 93.38 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 55 | 8.3E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 61 | 4.45E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 66 | 2.6E-9 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 1.6E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 8.543671 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 216 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021768932.1 | putative F-box protein At3g17480 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MP43 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.