Basic Information
Locus ID:
Ah014892
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 8082578 | 8088909 | - | Ah014892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 70,159.61 Da | 34.46 | 91.27 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 298 | 563 | 7.5E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 176 | 3.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 4.5E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 567 | 1.05E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 190 | 2.44E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 207 | 5.9E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 373 | 1.9E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 584 | 3.1E-60 | - |
| SMART | SM00220 | serkin_6 | 297 | 552 | 1.3E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 576 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021756833.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X1 [Chenopodium quinoa] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QWR0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology