Basic Information
Locus ID:
Ah014340
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_481_HRSCAF_623 | 1849541 | 1855600 | - | Ah014340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 66,528.60 Da | 45.59 | 102.98 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 249 | 271 | 0.16 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 542 | 564 | 2.0 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 222 | 246 | 0.16 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 197 | 220 | 0.0034 | IPR001611 |
| Pfam | PF00646 | F-box domain | 57 | 97 | 7.0E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 52 | 93 | 1.44E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 395 | 9.03E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 279 | 626 | 7.59E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 222 | 9.5E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 50 | 96 | 5.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 429 | 627 | 5.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 428 | 8.9E-36 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 223 | 248 | 1.6E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 462 | 487 | 0.0094 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 38.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 542 | 566 | 8.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 594 | 619 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 249 | 274 | 4.4E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 355 | 380 | 77.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 171 | 196 | 0.032 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 568 | 593 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 197 | 222 | 2.0E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 436 | 461 | 53.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 329 | 354 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 301 | 326 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.013 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021741735.1 | EIN3-binding F-box protein 2-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LHA0 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology