halophFGD

Basic Information

Locus ID: Ah014068

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_1312_HRSCAF_2063	101369505	101371162	+	Ah014068

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.74	24,720.29 Da	32.06	93.05	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	113	210	7.0E-7	IPR001245
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	2	98	4.4E-11	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	2	212	1.57E-33	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	103	1.2E-21	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	104	219	1.3E-18	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	220	9.870492	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G07180.1	Protein kinase superfamily protein.
RefSeq	XP_021844586.1	probable serine/threonine-protein kinase PBL3 isoform X2 [Spinacia oleracea]
Swiss-Prot	Q8H1E3	Probable serine/threonine-protein kinase PBL17 OS=Arabidopsis thaliana OX=3702 GN=PBL17 PE=1 SV=1
TrEMBL	A0A7N2L9A5	Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for Ah014068.