Basic Information
Locus ID:
Ah014063
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 101298984 | 101305772 | + | Ah014063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 22,764.81 Da | 65.46 | 87.24 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 192 | 1.64903E-65 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 8 | 110 | 5.9E-39 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 152 | 191 | 5.7E-7 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 113 | 7.74E-47 | IPR016135 |
| SUPERFAMILY | SSF54495 | UBC-like | 151 | 197 | 2.6E-11 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 125 | 2.4E-49 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 146 | 198 | 2.3E-11 | IPR016135 |
| SMART | SM00212 | ubc_7 | 7 | 197 | 2.7E-47 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 4 | 197 | 48.596844 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 77 | 92 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_007152325.1 | hypothetical protein PHAVU_004G120300g [Phaseolus vulgaris] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A445AZW7 | UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056953 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology