Basic Information
Locus ID:
Ah013997
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 100581601 | 100585211 | + | Ah013997 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 38,028.33 Da | 52.18 | 93.85 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 34 | 122 | 2.7E-6 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 234 | 318 | 5.8E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 210 | 322 | 7.3E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 20 | 125 | 1.0E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 307 | 6.1E-37 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 232 | 374 | 16.442802 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 18 | 125 | 11.283893 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 238 | 260 | - | IPR017441 |
| Coils | Coil | Coil | 325 | 325 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_021745627.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803L1E3 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013997 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61233 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22962 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002320, CQ.Regalona.r1.6BG0002300 |