Basic Information
Locus ID:
Ah013714
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
GSK3
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 97555414 | 97556874 | - | Ah013714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 11,589.40 Da | 53.28 | 90.51 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 10 | 96 | 1.8E-12 | - |
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05840.1 | Protein kinase superfamily protein. encodes a SHAGGY-like kinase involved in meristem organization. | 0 |
| RefSeq | XP_050281715.1 | shaggy-related protein kinase gamma-like [Quercus robur] | 0 |
| P51137 | Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa OX=3879 GN=MSK-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A392QGL2 | Shaggy-related protein kinase alpha (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah013714, Ah029388 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.2341s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g24170 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9582 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.903 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00018796 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0404751, Pt_Chr0506121 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G000570, Chr11G006120 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G720900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG070380 |
| Poaceae | Triticum aestivum | 2 | TraesCS1A02G213200.1.cds1, TraesCS3A02G125000.1.cds1 |