Basic Information
Locus ID:
Ah013596
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 95983490 | 95989970 | + | Ah013596 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 66,677.49 Da | 41.73 | 99.55 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 7.1E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 272 | 553 | 1.4E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 248 | 555 | 1.03E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 188 | 9.72E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 349 | 574 | 4.9E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 240 | 347 | 1.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 206 | 3.9E-44 | IPR032675 |
| SMART | SM00220 | serkin_6 | 271 | 555 | 3.6E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 271 | 560 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 277 | 299 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_021742991.1 | protein NSP-INTERACTING KINASE 3-like [Chenopodium quinoa] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L0M9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology