Basic Information
Locus ID:
Ah013583
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 95829463 | 95834154 | + | Ah013583 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 68,330.60 Da | 49.88 | 80.71 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 477 | 592 | 2.6E-13 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 279 | 468 | 4.57E-20 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 472 | 595 | 3.1E-21 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 65 | 116 | 3.7E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 471 | 605 | 7.7E-31 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 277 | 376 | 7.0E-9 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 477 | 605 | 21.804609 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 74 | 115 | 8.522677 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 276 | 601 | 127.839371 | IPR030380 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 554 | 566 | - | IPR018117 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 78 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15380.1 | domains rearranged methylase 1. Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences. | 0 |
| RefSeq | XP_021727470.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Chenopodium quinoa] | 0 |
| Q9LXE5 | DNA (cytosine-5)-methyltransferase DRM1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803LJC0 | DNA (Cytosine-5)-methyltransferase DRM2 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology