Basic Information
Locus ID:
Ah013535
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 95301065 | 95304211 | + | Ah013535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 53,569.37 Da | 38.26 | 120.17 | 0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 32 | 412 | 5.8989E-39 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 72 | 387 | 2.9E-21 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 71 | 397 | 1.83E-28 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 26 | 420 | 5.3E-32 | IPR036259 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 311 | 332 | 1.4E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 155 | 176 | 1.4E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 371 | 394 | 1.4E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 70 | 86 | 1.4E-7 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021740764.1 | hippocampus abundant transcript-like protein 1 isoform X1 [Chenopodium quinoa] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LJ67 | MFS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology