Basic Information
Locus ID:
Ah012639
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 72979700 | 73004749 | - | Ah012639 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 113,249.83 Da | 31.73 | 86.39 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 31 | 306 | 0.0 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 884 | 994 | 6.4E-9 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 348 | 438 | 2.8E-21 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 589 | 802 | 3.1E-48 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 32 | 343 | 5.3E-96 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 20 | 344 | 6.67E-113 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 347 | 440 | 7.85E-29 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 449 | 997 | 1.22E-135 | IPR011013 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 391 | 445 | 5.2E-20 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 870 | 1002 | 4.6E-31 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 587 | 850 | 3.8E-92 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 461 | 586 | 4.8E-27 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 312 | 390 | 2.2E-31 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 31 | 311 | 5.0E-124 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 348 | 422 | 1.5E-21 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_021762461.1 | alpha-mannosidase At3g26720-like isoform X1 [Chenopodium quinoa] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MZI9 | Alpha-mannosidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology