Basic Information
Locus ID:
Ah012593
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 71599334 | 71602495 | + | Ah012593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 115,394.89 Da | 35.23 | 107.33 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 783 | 1051 | 8.36118E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 779 | 978 | 1.1E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 7.3E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 602 | 661 | 9.9E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 244 | 265 | 0.56 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 144 | 1.9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 757 | 1048 | 1.62E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 87 | 395 | 7.85E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 482 | 673 | 6.8E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 741 | 852 | 3.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 853 | 1052 | 9.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 192 | 3.7E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 572 | 690 | 4.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 463 | 4.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 278 | 9.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 571 | 2.2E-12 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 3.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 576 | 600 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 37.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 777 | 1052 | 9.3E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 648 | 674 | 82.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 777 | 1051 | 39.396416 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 897 | 909 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 783 | 805 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021762442.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MZH7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology