Basic Information
Locus ID:
Ah012494
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Oligouridylate-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 67591403 | 67596183 | - | Ah012494 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 10,981.99 Da | 17.68 | 50.71 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 3 | 69 | 3.14E-8 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 21 | 70 | 1.4E-6 | IPR012677 |
| Gene3D | G3DSA:3.30.70.330 | - | 4 | 20 | 1.4E-6 | IPR012677 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 98 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17370.2 | oligouridylate binding protein 1B. | 0 |
| RefSeq | XP_021720428.1 | oligouridylate-binding protein 1B-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9LQI9 | Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KQY9 | Oligouridylate-binding protein 1-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology