Basic Information
Locus ID:
Ah012409
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 65632558 | 65666718 | - | Ah012409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 177,938.80 Da | 35.34 | 97.22 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 481 | 581 | 1.5E-19 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 1226 | 1379 | 2.5E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1203 | 1536 | 8.08E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 435 | 621 | 3.1E-33 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 656 | 963 | 5.44E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 348 | 5.1E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 638 | 794 | 5.9E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1301 | 1394 | 3.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 173 | 5.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 795 | 972 | 4.7E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 636 | 2.4E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1473 | 1587 | 4.7E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 251 | 6.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 252 | 355 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1199 | 1300 | 3.2E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 231 | 254 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 873 | 896 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 129 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 746 | 770 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 697 | 722 | 390.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1225 | 1581 | 2.4E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1225 | 1621 | 33.544941 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 625 | 18.492231 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1610 | 1621 | 9.165911 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 497 | 509 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1231 | 1253 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1345 | 1357 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720954.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMJ9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology