Basic Information
Locus ID:
Ah012173
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 53490933 | 53498785 | + | Ah012173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 46,283.04 Da | 38.12 | 80.00 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07712 | Stress up-regulated Nod 19 | 335 | 413 | 1.5E-33 | IPR011692 |
| Pfam | PF07712 | Stress up-regulated Nod 19 | 267 | 322 | 1.3E-21 | IPR011692 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 149 | 223 | 4.58E-5 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 148 | 228 | 1.5E-8 | IPR015943 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 73 | 147 | 9.3E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61820.1 | 0 | |
| RefSeq | XP_021731678.1 | uncharacterized protein LOC110698538 [Chenopodium quinoa] | 0 |
| Q9SYM4 | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NBE7 | Stress up-regulated Nod 19 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah012173, Ah020294, Ah022909 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0004_0180.v2.2 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG013740, gene_TRIDC6BG040670 |