Basic Information
Locus ID:
Ah011681
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 32386156 | 32395939 | + | Ah011681 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 92,859.27 Da | 64.43 | 68.84 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 784 | 813 | 4.1E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 773 | 820 | 7.2E-10 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 163 | - | - |
| Coils | Coil | Coil | 358 | 378 | - | - |
| Coils | Coil | Coil | 731 | 758 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_021732900.1 | uncharacterized protein LOC110699684 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803M6F8 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology