Basic Information
Locus ID:
Ah011548
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 28517384 | 28528698 | + | Ah011548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 87,570.68 Da | 46.10 | 78.36 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 357 | 404 | 1.5E-13 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 170 | 225 | 2.0E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 423 | 463 | 3.3E-8 | IPR019787 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 667 | 755 | 1.04E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 519 | 565 | 5.14E-7 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 404 | 464 | 2.47E-17 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 486 | 580 | 3.8E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 414 | 480 | 1.4E-17 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 617 | 782 | 2.4E-7 | - |
| SMART | SM00249 | PHD_3 | 511 | 568 | 0.5 | IPR001965 |
| SMART | SM00249 | PHD_3 | 422 | 463 | 2.3E-11 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 420 | 465 | 10.495699 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 423 | 462 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 316 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021732895.1 | uncharacterized protein LOC110699677 [Chenopodium quinoa] | 0 |
| Q9Z0E3 | Autoimmune regulator OS=Mus musculus OX=10090 GN=Aire PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6E4 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology