Basic Information
Locus ID:
Ah011352
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 22142716 | 22148678 | - | Ah011352 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 56,308.39 Da | 48.12 | 97.67 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 41 | 77 | 7.0E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 164 | 379 | 4.32E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 37 | 86 | 1.44E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 26 | 80 | 4.0E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 397 | 1.1E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 44 | 83 | 0.0078 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 38 | 85 | 9.947874 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G44950.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021749865.1 | F-box/FBD/LRR-repeat protein At1g51370-like [Chenopodium quinoa] | 0 |
| Q9FLA2 | Putative F-box/FBD/LRR-repeat protein At5g44950 OS=Arabidopsis thaliana OX=3702 GN=At5g44950 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803M617 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology