HalophFGD

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Basic Information
Locus ID: Ah011052
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: Heavy-metal-associated domain
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 17636306 17640934 - Ah011052
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.11 122,925.21 Da 47.84 92.01 -0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF11145 Protein of unknown function (DUF2921) 51 912 5.4E-116 IPR021319
SUPERFAMILY SSF55008 HMA, heavy metal-associated domain 941 995 1.57E-5 IPR036163
Gene3D G3DSA:3.30.70.100 - 929 1002 2.0E-14 -
Gene Ontology
Molecular Function:
GO:0046872 (metal ion binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G52780.1 Protein of unknown function (DUF2921). 0
RefSeq XP_021749900.1 uncharacterized protein LOC110715619 [Chenopodium quinoa] 0
TrEMBL A0A803MLY4 Transmembrane protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_13441
Amaranthaceae Atriplex hortensis 1 Ah011052
Amaranthaceae Beta vulgaris 1 BVRB_5g121990
Amaranthaceae Suaeda glauca 2 Sgl54553, Sgl59895
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.9AG0011990, CQ.Regalona.r1.9AG0012000 ...
CQ.Regalona.r1.9BG0010490
Portulacaceae Portulaca oleracea 2 evm.TU.LG02.1266, evm.TU.LG09.701
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-25560
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