Basic Information
Locus ID:
Ah010889
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 15045243 | 15050020 | + | Ah010889 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 32,663.18 Da | 44.27 | 61.37 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 30 | 289 | 1.4E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 180 | 280 | 8.83E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 174 | 293 | 5.8E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 180 | 281 | 26.12879 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 142 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_021765302.1 | auxin-responsive protein IAA27-like [Chenopodium quinoa] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLQ5 | Auxin-responsive protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology