Basic Information
Locus ID:
Ah010879
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 14814079 | 14816787 | - | Ah010879 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 26,302.08 Da | 69.39 | 81.33 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 125 | 182 | 2.35E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 133 | 173 | 8.4E-8 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021739452.1 | uncharacterized protein LOC110705827 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LBC5 | DUF295 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah010879, Ah010883 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg60894, Sbi_jg60899 |
| Amaranthaceae | Salicornia europaea | 9 | Seu_jg17617, Seu_jg22467, Seu_jg22477, Seu_jg22478 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019041 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl15092, Sgl20220 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000051061 |