HalophFGD

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Basic Information
Locus ID: Ah010838
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 14231542 14231868 - Ah010838
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.70 12,439.92 Da 51.54 123.70 0.57
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 26 66 1.6E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 19 76 1.7E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 21 75 4.1E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021858015.1 F-box/kelch-repeat protein At3g23880-like [Spinacia oleracea] 0
TrEMBL A0A0K9QGN5 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_187030 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah010838, Ah022478, Ah022479, Ah022480
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.