Basic Information
Locus ID:
Ah010552
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 10965535 | 10968227 | - | Ah010552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 30,088.38 Da | 62.90 | 74.16 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 49 | 83 | 1.66179E-6 | - |
| Pfam | PF02845 | CUE domain | 47 | 83 | 2.3E-5 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 40 | 92 | 2.44E-9 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 39 | 95 | 2.7E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 45 | 91 | 10.585606 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 125 | - | - |
| Coils | Coil | Coil | 176 | 196 | - | - |
| Coils | Coil | Coil | 214 | 241 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_021731814.1 | uncharacterized protein LOC110698643 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LEA5 | CUE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology