HalophFGD

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Basic Information
Locus ID: Ah010531
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: F-box protein
Maps and Mapping Data
Chromosome/Scaffold Start End Strand ID
Scaffold_1312_HRSCAF_2063 10728166 10729389 - Ah010531
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.12 46,494.25 Da 36.78 81.82 -0.32
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 12 79 7.98E-9 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 128 333 1.2E-12 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021736521.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803LMX6 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 12 Ah008721, Ah008722, Ah010459, Ah010460, Ah010461, Ah010463 ...
Ah010531, Ah011579, Ah012263, Ah020071, Ah024643, Ah039173
Amaranthaceae Salicornia bigelovii 3 Sbi_jg18919, Sbi_jg37371, Sbi_jg46783
Amaranthaceae Salicornia europaea 4 Seu_jg20868, Seu_jg20869, Seu_jg495, Seu_jg5210
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.7BG0009470
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.