Basic Information
Locus ID:
Ah010530
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 10711946 | 10721712 | - | Ah010530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 93,278.53 Da | 45.42 | 81.90 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 118 | 2.22E-7 | IPR036047 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 121 | 332 | 5.9E-13 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 469 | 682 | 3.1E-15 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 757 | - | - |
| Coils | Coil | Coil | 726 | 757 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021732152.1 | F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LE88 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 14 | Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ... |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg11619 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ... |
| Amaranthaceae | Chenopodium quinoa | 12 | CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ... |