HalophFGD

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Basic Information
Locus ID: Ah010521
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 10582682 10584643 - Ah010521
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.04 40,808.40 Da 35.50 86.37 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 27 60 4.4E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 13 69 3.14E-6 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 92 308 2.2E-12 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021732152.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803LE87 FBA_1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 14 Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ...
Ah010521, Ah010523, Ah010524, Ah010525, Ah010526, Ah010529, Ah010530, Ah010533
Amaranthaceae Salicornia bigelovii 1 Sbi_jg11619
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ...
gene:ENSEOMG00000052018
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ...
CQ.Regalona.r1.7BG0009490, CQ.Regalona.r1.7BG0009500, CQ.Regalona.r1.7BG0009510, CQ.Regalona.r1.7BG0009520, CQ.Regalona.r1.9AG0015070, CQ.Regalona.r1.9AG0015080, CQ.Regalona.r1.9AG0015090, CQ.Regalona.r1.9AG0015100, CQ.Regalona.r1.9AG0015110, CQ.Regalona.r1.9AG0015120
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.