HalophFGD

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Basic Information
Locus ID: Ah010519
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: F-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 10555820 10557007 - Ah010519
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.83 42,102.57 Da 48.05 83.20 -0.42
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 66 283 1.6E-15 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021736522.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803LE84 FBA_1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 14 Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ...
Ah010521, Ah010523, Ah010524, Ah010525, Ah010526, Ah010529, Ah010530, Ah010533
Amaranthaceae Salicornia bigelovii 1 Sbi_jg11619
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ...
gene:ENSEOMG00000052018
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ...
CQ.Regalona.r1.7BG0009490, CQ.Regalona.r1.7BG0009500, CQ.Regalona.r1.7BG0009510, CQ.Regalona.r1.7BG0009520, CQ.Regalona.r1.9AG0015070, CQ.Regalona.r1.9AG0015080, CQ.Regalona.r1.9AG0015090, CQ.Regalona.r1.9AG0015100, CQ.Regalona.r1.9AG0015110, CQ.Regalona.r1.9AG0015120
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.