HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ah010513
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 10478268 10478825 - Ah010513
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.66 21,593.82 Da 51.66 75.24 -0.74
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 100 137 - -
MobiDBLite mobidb-lite consensus disorder prediction 93 137 - -
Coils Coil Coil 107 131 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021732151.1 putative F-box/kelch-repeat protein At1g12870 [Chenopodium quinoa] 0
TrEMBL A0A803LMX7 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 14 Ah010513, Ah010514, Ah010515, Ah010517, Ah010518, Ah010519 ...
Ah010521, Ah010523, Ah010524, Ah010525, Ah010526, Ah010529, Ah010530, Ah010533
Amaranthaceae Salicornia bigelovii 1 Sbi_jg11619
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000014872, gene:ENSEOMG00000039400 ...
gene:ENSEOMG00000052018
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.7BG0009460, CQ.Regalona.r1.7BG0009480 ...
CQ.Regalona.r1.7BG0009490, CQ.Regalona.r1.7BG0009500, CQ.Regalona.r1.7BG0009510, CQ.Regalona.r1.7BG0009520, CQ.Regalona.r1.9AG0015070, CQ.Regalona.r1.9AG0015080, CQ.Regalona.r1.9AG0015090, CQ.Regalona.r1.9AG0015100, CQ.Regalona.r1.9AG0015110, CQ.Regalona.r1.9AG0015120
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.