HalophFGD

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Basic Information
Locus ID: Ah010463
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome/Scaffold Start End Strand ID
Scaffold_1312_HRSCAF_2063 9913407 9914580 + Ah010463
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.20 37,730.05 Da 44.12 75.89 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 14 55 1.5E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 146 3.01E-10 IPR036047
SMART SM00256 fbox_2 16 57 0.0075 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G13200.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021742823.1 F-box protein At1g67130-like [Chenopodium quinoa] 0
Swiss-Prot Q9SAF4 Putative F-box/kelch-repeat protein At1g13200 OS=Arabidopsis thaliana OX=3702 GN=At1g13200 PE=4 SV=1 0
TrEMBL A0A0K9RC38 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_087520 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 12 Ah008721, Ah008722, Ah010459, Ah010460, Ah010461, Ah010463 ...
Ah010531, Ah011579, Ah012263, Ah020071, Ah024643, Ah039173
Amaranthaceae Salicornia bigelovii 3 Sbi_jg18919, Sbi_jg37371, Sbi_jg46783
Amaranthaceae Salicornia europaea 4 Seu_jg20868, Seu_jg20869, Seu_jg495, Seu_jg5210
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.7BG0009470
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.