Basic Information
Locus ID:
Ah010407
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 9400871 | 9401533 | - | Ah010407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 21,351.66 Da | 26.56 | 116.25 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 150 | 186 | 3.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 145 | 189 | 8.5E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 138 | 189 | 2.7E-8 | - |
| SMART | SM00256 | fbox_2 | 152 | 192 | 0.0018 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 146 | 192 | 12.597314 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51370.2 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021776111.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A8S9IZA4 | F-box domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q70_00004828 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.