Basic Information
Locus ID:
Ah010347
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 8837963 | 8839304 | - | Ah010347 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 30,329.45 Da | 33.69 | 88.00 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 82 | 1.11E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 59 | 4.5E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021742927.1 | F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] | 0 |
| Q9C6J3 | Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803LMX0 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 4 | Ah006920, Ah010347, Ah010827, Ah037108 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg46576 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl70951, Sgl74470, Sgl74565 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000019836, gene:ENSEOMG00000020147 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.3AG0025030, CQ.Regalona.r1.4BG0008370 ... |