halophFGD

Basic Information

Locus ID: Ah010341

Species & Taxonomic ID: Atriplex hortensis & 34272

Genome Assembly: Atriplex hortensis v2.0

Description: B3 domain-containing

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Scaffold_1312_HRSCAF_2063	8779829	8782132	-	Ah010341

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.48	20,902.58 Da	64.08	58.87	-1.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd10017	B3_DNA	8	89	7.6419E-10	IPR003340
Pfam	PF02362	B3 DNA binding domain	14	86	1.2E-12	IPR003340
SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	7	94	1.14E-18	IPR015300
Gene3D	G3DSA:2.40.330.10	-	2	94	1.1E-18	IPR015300
SMART	SM01019	B3_2	11	92	4.3E-7	IPR003340
ProSiteProfiles	PS50863	B3 DNA-binding domain profile.	1	92	13.084021	IPR003340
MobiDBLite	mobidb-lite	consensus disorder prediction	104	177	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	151	165	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	104	128	-	-
Coils	Coil	Coil	107	127	-	-

Gene Ontology

Molecular Function:

GO:0003677 (DNA binding)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_021731681.1	B3 domain-containing protein At4g34400-like [Chenopodium quinoa]
Swiss-Prot	Q851V5	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1
TrEMBL	A0A0K9QGH9	TF-B3 domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_188220 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah010341
Poaceae	Lolium multiflorum	63	gene-QYE76_000417, gene-QYE76_000952, gene-QYE76_000953 ... gene-QYE76_004078, gene-QYE76_006370, gene-QYE76_006747, gene-QYE76_007190, gene-QYE76_007192, gene-QYE76_008031, gene-QYE76_008098, gene-QYE76_009674, gene-QYE76_010262, gene-QYE76_011455, gene-QYE76_011830, gene-QYE76_013081, gene-QYE76_013160, gene-QYE76_013879, gene-QYE76_015237, gene-QYE76_015599, gene-QYE76_015642, gene-QYE76_019639, gene-QYE76_021499, gene-QYE76_022696, gene-QYE76_023164, gene-QYE76_023353, gene-QYE76_024027, gene-QYE76_025298, gene-QYE76_026881, gene-QYE76_029418, gene-QYE76_032449, gene-QYE76_032773, gene-QYE76_032869, gene-QYE76_033465, gene-QYE76_035708, gene-QYE76_038587, gene-QYE76_038614, gene-QYE76_040300, gene-QYE76_040472, gene-QYE76_040956, gene-QYE76_041894, gene-QYE76_043162, gene-QYE76_043195, gene-QYE76_043460, gene-QYE76_043765, gene-QYE76_043936, gene-QYE76_048336, gene-QYE76_050540, gene-QYE76_052508, gene-QYE76_053572, gene-QYE76_054763, gene-QYE76_055454, gene-QYE76_056942, gene-QYE76_061052, gene-QYE76_061237, gene-QYE76_062043, gene-QYE76_063140, gene-QYE76_064469, gene-QYE76_065058, gene-QYE76_065119, gene-QYE76_067099, gene-QYE76_068004, gene-QYE76_069573, gene-QYE76_070249