HalophFGD

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Basic Information
Locus ID: Ah010303
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 8490297 8521669 + Ah010303
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.78 432,407.66 Da 33.72 107.10 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 650 945 6.96308E-82 -
CDD cd14066 STKc_IRAK 1651 1949 6.6035E-81 -
Pfam PF00560 Leucine Rich Repeat 109 131 1.6 IPR001611
Pfam PF00560 Leucine Rich Repeat 1354 1376 1.6 IPR001611
Pfam PF00560 Leucine Rich Repeat 3184 3205 1.4 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 2924 2961 5.2E-8 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 34 72 9.5E-10 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 968 1006 4.3E-11 IPR013210
Pfam PF00560 Leucine Rich Repeat 2124 2146 0.23 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 1985 2023 2.4E-9 IPR013210
Pfam PF00560 Leucine Rich Repeat 500 521 0.8 IPR001611
Pfam PF00069 Protein kinase domain 3599 3871 2.7E-40 IPR000719
Pfam PF00069 Protein kinase domain 1647 1871 6.9E-39 IPR000719
Pfam PF00069 Protein kinase domain 2652 2856 8.4E-34 IPR000719
Pfam PF00069 Protein kinase domain 646 869 7.0E-38 IPR000719
Pfam PF13855 Leucine rich repeat 1475 1533 1.7E-7 IPR001611
Pfam PF13855 Leucine rich repeat 2447 2502 1.2E-6 IPR001611
Pfam PF13855 Leucine rich repeat 3236 3296 4.6E-7 IPR001611
Pfam PF00560 Leucine Rich Repeat 3406 3428 0.81 IPR001611
Pfam PF13855 Leucine rich repeat 2346 2405 2.9E-8 IPR001611
SUPERFAMILY SSF52058 L domain-like 1985 2279 4.19E-63 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1621 1946 2.56E-69 IPR011009
SUPERFAMILY SSF52058 L domain-like 280 559 3.74E-59 -
SUPERFAMILY SSF52058 L domain-like 2922 3218 1.36E-64 -
SUPERFAMILY SSF52058 L domain-like 968 1263 8.28E-64 -
SUPERFAMILY SSF52058 L domain-like 34 296 9.18E-44 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 623 942 4.72E-66 IPR011009
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 3574 3898 1.89E-65 IPR011009
SUPERFAMILY SSF52058 L domain-like 2293 2575 9.52E-65 -
SUPERFAMILY SSF52058 L domain-like 3233 3514 8.16E-63 -
SUPERFAMILY SSF52058 L domain-like 1270 1545 6.8E-55 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 2631 2918 1.09E-58 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 2733 2925 1.2E-40 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1607 1726 7.4E-24 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 32 202 4.3E-45 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2926 3202 1.6E-77 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 203 251 3.6E-6 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 726 968 7.1E-55 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1983 2262 1.0E-77 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 969 1084 8.6E-32 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2263 2594 1.5E-89 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1085 1267 1.2E-45 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 625 725 1.5E-22 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 2632 2732 1.8E-22 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1727 1967 1.8E-54 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 3203 3533 1.3E-85 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 3680 3919 3.3E-55 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 3578 3679 2.8E-23 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1268 1570 1.8E-87 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 252 572 3.5E-84 IPR032675
SMART SM00365 LRR_sd22_2 1352 1378 67.0 -
SMART SM00365 LRR_sd22_2 353 379 11.0 -
SMART SM00365 LRR_sd22_2 1058 1081 200.0 -
SMART SM00365 LRR_sd22_2 2074 2097 430.0 -
SMART SM00365 LRR_sd22_2 3404 3419 230.0 -
SMART SM00365 LRR_sd22_2 3452 3478 770.0 -
SMART SM00365 LRR_sd22_2 2122 2148 72.0 -
SMART SM00365 LRR_sd22_2 107 133 170.0 -
SMART SM00220 serkin_6 3598 3903 3.7E-27 IPR000719
SMART SM00220 serkin_6 644 946 2.0E-24 IPR000719
SMART SM00220 serkin_6 2651 2927 1.6E-24 IPR000719
SMART SM00220 serkin_6 1645 1947 2.7E-30 IPR000719
SMART SM00365 LRR_sd22_2 2465 2480 750.0 -
SMART SM00365 LRR_sd22_2 1304 1330 260.0 -
SMART SM00365 LRR_sd22_2 2170 2196 440.0 -
SMART SM00365 LRR_sd22_2 3331 3357 88.0 -
SMART SM00365 LRR_sd22_2 3013 3036 65.0 -
SMART SM00365 LRR_sd22_2 497 528 320.0 -
SMART SM00365 LRR_sd22_2 2392 2407 500.0 -
SMART SM00365 LRR_sd22_2 1497 1523 320.0 -
SMART SM00365 LRR_sd22_2 3259 3285 260.0 -
SMART SM00365 LRR_sd22_2 3182 3210 86.0 -
SMART SM00369 LRR_typ_2 2170 2194 11.0 IPR003591
SMART SM00369 LRR_typ_2 353 376 36.0 IPR003591
SMART SM00369 LRR_typ_2 3404 3428 11.0 IPR003591
SMART SM00369 LRR_typ_2 3013 3037 11.0 IPR003591
SMART SM00369 LRR_typ_2 3109 3133 11.0 IPR003591
SMART SM00369 LRR_typ_2 1497 1521 54.0 IPR003591
SMART SM00369 LRR_typ_2 1034 1057 330.0 IPR003591
SMART SM00369 LRR_typ_2 3331 3355 37.0 IPR003591
SMART SM00369 LRR_typ_2 1376 1400 23.0 IPR003591
SMART SM00369 LRR_typ_2 2465 2489 35.0 IPR003591
SMART SM00369 LRR_typ_2 497 520 61.0 IPR003591
SMART SM00369 LRR_typ_2 1401 1424 56.0 IPR003591
SMART SM00369 LRR_typ_2 450 474 31.0 IPR003591
SMART SM00369 LRR_typ_2 2122 2145 120.0 IPR003591
SMART SM00369 LRR_typ_2 1178 1202 260.0 IPR003591
SMART SM00369 LRR_typ_2 377 401 310.0 IPR003591
SMART SM00369 LRR_typ_2 107 131 48.0 IPR003591
SMART SM00369 LRR_typ_2 3061 3085 80.0 IPR003591
SMART SM00369 LRR_typ_2 1352 1375 99.0 IPR003591
SMART SM00369 LRR_typ_2 522 545 130.0 IPR003591
SMART SM00369 LRR_typ_2 3452 3476 100.0 IPR003591
SMART SM00369 LRR_typ_2 1058 1082 47.0 IPR003591
SMART SM00369 LRR_typ_2 2392 2416 52.0 IPR003591
SMART SM00369 LRR_typ_2 1106 1130 400.0 IPR003591
SMART SM00369 LRR_typ_2 155 179 56.0 IPR003591
SMART SM00369 LRR_typ_2 2050 2074 59.0 IPR003591
SMART SM00369 LRR_typ_2 2344 2368 100.0 IPR003591
SMART SM00369 LRR_typ_2 3307 3330 130.0 IPR003591
SMART SM00369 LRR_typ_2 2219 2243 170.0 IPR003591
SMART SM00369 LRR_typ_2 2513 2541 110.0 IPR003591
SMART SM00369 LRR_typ_2 1304 1328 34.0 IPR003591
SMART SM00369 LRR_typ_2 2989 3012 74.0 IPR003591
SMART SM00369 LRR_typ_2 2417 2440 76.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 644 918 34.449516 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 2651 2901 29.672226 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 3598 3923 34.95834 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 3184 3206 7.688853 IPR001611
ProSiteProfiles PS51450 Leucine-rich repeat profile. 1499 1521 7.257614 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 1645 1954 35.891186 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2776 2788 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 650 673 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2657 2680 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 3735 3747 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 781 793 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 3604 3627 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1651 1674 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1784 1796 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47090.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_048493165.1 uncharacterized protein LOC104905013 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot C0LGP4 Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 0
TrEMBL A0A803LP16 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah010296, Ah010299, Ah010303
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