HalophFGD

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Basic Information
Locus ID: Ah010299
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 8449373 8476354 + Ah010299
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.50 393,720.91 Da 35.14 105.71 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 3273 3568 1.67926E-83 -
Pfam PF08263 Leucine rich repeat N-terminal domain 1569 1607 4.5E-10 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 2642 2678 6.4E-8 IPR013210
Pfam PF00069 Protein kinase domain 2184 2419 3.3E-35 IPR000719
Pfam PF00069 Protein kinase domain 277 382 3.8E-11 IPR000719
Pfam PF13855 Leucine rich repeat 1708 1767 2.8E-8 IPR001611
Pfam PF13855 Leucine rich repeat 604 663 2.5E-7 IPR001611
Pfam PF00069 Protein kinase domain 1142 1390 6.7E-40 IPR000719
Pfam PF08263 Leucine rich repeat N-terminal domain 465 503 2.6E-10 IPR013210
Pfam PF00069 Protein kinase domain 3269 3516 3.4E-40 IPR000719
SUPERFAMILY SSF52058 L domain-like 2484 2588 1.9E-16 -
SUPERFAMILY SSF52058 L domain-like 2642 2921 1.39E-50 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 277 397 9.04E-21 IPR011009
SUPERFAMILY SSF52058 L domain-like 779 1056 1.81E-52 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 3249 3565 7.55E-68 IPR011009
SUPERFAMILY SSF52058 L domain-like 1568 1863 9.18E-62 -
SUPERFAMILY SSF52058 L domain-like 464 759 6.46E-61 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 2165 2463 4.05E-61 IPR011009
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1466 1556 9.98E-19 IPR011009
SUPERFAMILY SSF52058 L domain-like 1878 2161 8.05E-52 -
SUPERFAMILY SSF52058 L domain-like 2904 3183 4.08E-60 -
SUPERFAMILY SSF52058 L domain-like 6 192 9.07E-19 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1114 1438 7.42E-67 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1223 1457 4.8E-55 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 245 408 2.2E-24 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1458 1563 9.3E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 463 622 7.8E-45 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 2265 2481 7.8E-49 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2484 2579 3.9E-21 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2956 3187 1.1E-62 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 623 768 5.4E-32 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1 194 6.3E-31 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2639 2795 1.1E-47 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2891 2955 2.3E-10 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1870 2166 3.8E-73 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 769 1070 1.4E-75 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1798 1869 1.7E-12 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1567 1717 1.0E-43 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1718 1797 1.4E-21 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 2167 2264 2.4E-21 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 3248 3348 6.7E-23 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1120 1222 6.3E-22 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 3349 3581 6.1E-58 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2796 2890 9.2E-15 IPR032675
SMART SM00365 LRR_sd22_2 896 922 630.0 -
SMART SM00365 LRR_sd22_2 2000 2026 400.0 -
SMART SM00365 LRR_sd22_2 3121 3147 150.0 -
SMART SM00365 LRR_sd22_2 554 577 16.0 -
SMART SM00365 LRR_sd22_2 993 1012 380.0 -
SMART SM00365 LRR_sd22_2 2928 2954 130.0 -
SMART SM00369 LRR_typ_2 602 626 130.0 IPR003591
SMART SM00369 LRR_typ_2 2802 2826 190.0 IPR003591
SMART SM00369 LRR_typ_2 1658 1682 10.0 IPR003591
SMART SM00369 LRR_typ_2 3000 3024 56.0 IPR003591
SMART SM00369 LRR_typ_2 945 969 150.0 IPR003591
SMART SM00365 LRR_sd22_2 2097 2123 360.0 -
SMART SM00365 LRR_sd22_2 2778 2804 45.0 -
SMART SM00369 LRR_typ_2 897 920 180.0 IPR003591
SMART SM00369 LRR_typ_2 1976 2000 34.0 IPR003591
SMART SM00369 LRR_typ_2 2049 2073 400.0 IPR003591
SMART SM00369 LRR_typ_2 3121 3145 100.0 IPR003591
SMART SM00365 LRR_sd22_2 40 65 270.0 -
SMART SM00365 LRR_sd22_2 2976 3002 130.0 -
SMART SM00365 LRR_sd22_2 1880 1906 450.0 -
SMART SM00365 LRR_sd22_2 872 891 530.0 -
SMART SM00365 LRR_sd22_2 1682 1705 430.0 -
SMART SM00365 LRR_sd22_2 650 676 15.0 -
SMART SM00220 serkin_6 2182 2471 2.2E-19 IPR000719
SMART SM00369 LRR_typ_2 1706 1729 96.0 IPR003591
SMART SM00369 LRR_typ_2 2706 2730 85.0 IPR003591
SMART SM00369 LRR_typ_2 113 137 35.0 IPR003591
SMART SM00369 LRR_typ_2 872 896 80.0 IPR003591
SMART SM00369 LRR_typ_2 3073 3097 61.0 IPR003591
SMART SM00220 serkin_6 1140 1408 1.7E-30 IPR000719
SMART SM00369 LRR_typ_2 2976 2999 130.0 IPR003591
SMART SM00220 serkin_6 3267 3534 1.7E-27 IPR000719
SMART SM00369 LRR_typ_2 3025 3048 230.0 IPR003591
SMART SM00369 LRR_typ_2 2097 2128 410.0 IPR003591
SMART SM00369 LRR_typ_2 699 723 280.0 IPR003591
SMART SM00369 LRR_typ_2 2928 2952 90.0 IPR003591
SMART SM00369 LRR_typ_2 1730 1753 300.0 IPR003591
SMART SM00369 LRR_typ_2 1754 1778 44.0 IPR003591
SMART SM00369 LRR_typ_2 554 578 13.0 IPR003591
SMART SM00369 LRR_typ_2 2001 2024 140.0 IPR003591
SMART SM00369 LRR_typ_2 650 674 95.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 3267 3538 36.710957 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 162 490 11.227356 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 1140 1415 36.159733 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 2182 2438 32.414223 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 3403 3415 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 3273 3296 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2188 2212 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1146 1170 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1277 1289 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2319 2331 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47090.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_048493165.1 uncharacterized protein LOC104905013 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot C0LGP4 Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 0
TrEMBL A0A803LP16 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah010296, Ah010299, Ah010303
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.