HalophFGD

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Basic Information
Locus ID: Ah010296
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_1312_HRSCAF_2063 8400797 8417321 + Ah010296
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.55 351,984.91 Da 35.90 106.84 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 1840 2139 8.2122E-82 -
Pfam PF08263 Leucine rich repeat N-terminal domain 71 108 5.9E-10 IPR013210
Pfam PF07714 Protein tyrosine and serine/threonine kinase 1837 2073 7.8E-39 IPR001245
Pfam PF13855 Leucine rich repeat 2727 2785 1.3E-7 IPR001611
Pfam PF13855 Leucine rich repeat 162 221 2.7E-6 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 1150 1188 1.8E-10 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 2220 2258 1.6E-11 IPR013210
Pfam PF00069 Protein kinase domain 746 964 9.1E-39 IPR000719
Pfam PF00069 Protein kinase domain 2900 3117 2.5E-37 IPR000719
SUPERFAMILY SSF52058 L domain-like 1465 1745 6.69E-60 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 720 1035 1.31E-64 IPR011009
SUPERFAMILY SSF52058 L domain-like 2219 2517 2.89E-61 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 2879 3192 2.7E-66 IPR011009
SUPERFAMILY SSF52058 L domain-like 71 368 2.72E-63 -
SUPERFAMILY SSF52058 L domain-like 1150 1448 9.41E-61 -
SUPERFAMILY SSF52058 L domain-like 2524 2819 1.55E-52 -
SUPERFAMILY SSF52058 L domain-like 385 661 9.01E-58 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1813 2136 1.27E-68 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 723 824 6.0E-21 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1267 1381 4.9E-30 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2218 2499 8.7E-76 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1151 1266 2.1E-32 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1917 2150 2.7E-57 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 304 372 4.3E-9 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 825 1056 3.1E-55 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 221 303 2.7E-21 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1455 1757 7.5E-86 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 373 673 9.9E-85 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 2982 3208 2.9E-54 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 68 220 1.1E-46 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 2500 2830 4.6E-85 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 2862 2981 9.2E-23 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1382 1454 5.4E-11 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1794 1916 2.0E-24 -
SMART SM00369 LRR_typ_2 2358 2382 250.0 IPR003591
SMART SM00369 LRR_typ_2 2310 2334 140.0 IPR003591
SMART SM00369 LRR_typ_2 256 280 70.0 IPR003591
SMART SM00369 LRR_typ_2 2628 2652 56.0 IPR003591
SMART SM00369 LRR_typ_2 624 647 240.0 IPR003591
SMART SM00369 LRR_typ_2 2406 2430 2.5 IPR003591
SMART SM00369 LRR_typ_2 599 623 120.0 IPR003591
SMART SM00369 LRR_typ_2 1360 1383 260.0 IPR003591
SMART SM00220 serkin_6 743 1045 5.9E-23 IPR000719
SMART SM00220 serkin_6 2899 3147 1.4E-24 IPR000719
SMART SM00369 LRR_typ_2 551 575 24.0 IPR003591
SMART SM00369 LRR_typ_2 2749 2772 58.0 IPR003591
SMART SM00369 LRR_typ_2 1336 1359 400.0 IPR003591
SMART SM00220 serkin_6 1834 2144 1.5E-28 IPR000719
SMART SM00369 LRR_typ_2 208 232 17.0 IPR003591
SMART SM00365 LRR_sd22_2 1288 1314 35.0 -
SMART SM00365 LRR_sd22_2 2358 2384 340.0 -
SMART SM00365 LRR_sd22_2 406 432 82.0 -
SMART SM00369 LRR_typ_2 1609 1634 27.0 IPR003591
SMART SM00365 LRR_sd22_2 1336 1362 590.0 -
SMART SM00365 LRR_sd22_2 1240 1263 15.0 -
SMART SM00365 LRR_sd22_2 2406 2432 23.0 -
SMART SM00365 LRR_sd22_2 208 234 110.0 -
SMART SM00365 LRR_sd22_2 1465 1491 6.3 -
SMART SM00365 LRR_sd22_2 160 183 600.0 -
SMART SM00365 LRR_sd22_2 256 282 13.0 -
SMART SM00369 LRR_typ_2 430 453 170.0 IPR003591
SMART SM00369 LRR_typ_2 2701 2725 51.0 IPR003591
SMART SM00369 LRR_typ_2 136 160 37.0 IPR003591
SMART SM00369 LRR_typ_2 478 502 15.0 IPR003591
SMART SM00369 LRR_typ_2 2604 2627 200.0 IPR003591
SMART SM00369 LRR_typ_2 1561 1584 370.0 IPR003591
SMART SM00369 LRR_typ_2 1682 1706 160.0 IPR003591
SMART SM00369 LRR_typ_2 352 386 300.0 IPR003591
SMART SM00369 LRR_typ_2 1288 1312 30.0 IPR003591
SMART SM00369 LRR_typ_2 1240 1264 18.0 IPR003591
SMART SM00369 LRR_typ_2 1216 1239 170.0 IPR003591
SMART SM00369 LRR_typ_2 503 526 220.0 IPR003591
SMART SM00369 LRR_typ_2 2455 2479 77.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 2899 3165 32.075005 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 1834 2109 36.159733 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 743 1045 34.562588 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 877 889 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1973 1985 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 3030 3042 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1840 1865 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2905 2930 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47090.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_048493165.1 uncharacterized protein LOC104905013 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q9SD62 Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 0
TrEMBL A0A803LP16 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah010296, Ah010299, Ah010303
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.