Basic Information
Locus ID:
Ah009759
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_1312_HRSCAF_2063 | 3785100 | 3788105 | - | Ah009759 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 102,911.76 Da | 34.34 | 90.12 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 603 | 876 | 1.25274E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 598 | 871 | 4.1E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 336 | 373 | 0.0023 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 395 | 435 | 6.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 3.8E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 155 | 3.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 446 | 4.08E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 882 | 5.71E-80 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 334 | 4.4E-79 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 890 | 2.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 557 | 674 | 7.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 460 | 1.5E-35 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 1.3E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 168 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 398 | 421 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 422 | 449 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 54.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 597 | 877 | 3.1E-43 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.234511 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 877 | 40.272724 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 635 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 485 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021753165.1 | receptor protein kinase TMK1-like [Chenopodium quinoa] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology