HalophFGD

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Basic Information
Locus ID: Ah008076
Species & Taxonomic ID: Atriplex hortensis & 34272
Genome Assembly: Atriplex hortensis v2.0
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Scaffold_579_HRSCAF_742 87786582 87788903 - Ah008076
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.91 34,329.89 Da 44.18 74.67 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF02902 Ulp1 protease family, C-terminal catalytic domain 141 244 2.1E-4 IPR003653
SUPERFAMILY SSF54001 Cysteine proteinases 119 241 3.73E-9 IPR038765
Gene3D G3DSA:3.40.395.10 Adenoviral Proteinase; Chain A 109 260 3.1E-8 -
Gene Ontology
Biological Process:
GO:0006508 (proteolysis)
Molecular Function:
GO:0008234 (cysteine-type peptidase activity)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021844554.1 uncharacterized protein LOC110784408 [Spinacia oleracea] 0
TrEMBL A0A803LLI4 ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 97 Ah000691, Ah000692, Ah002157, Ah002158, Ah002744, Ah002745 ...
Ah006601, Ah008027, Ah008048, Ah008049, Ah008050, Ah008051, Ah008052, Ah008053, Ah008076, Ah008077, Ah008078, Ah008083, Ah008085, Ah008285, Ah008286, Ah008287, Ah008288, Ah010867, Ah010869, Ah011389, Ah011390, Ah011741, Ah011742, Ah011743, Ah011807, Ah012484, Ah013317, Ah015272, Ah015273, Ah015274, Ah015314, Ah017635, Ah019847, Ah019918, Ah020007, Ah020008, Ah020979, Ah021027, Ah022567, Ah022569, Ah024805, Ah025051, Ah025052, Ah025145, Ah025146, Ah025241, Ah025242, Ah025571, Ah025579, Ah025580, Ah025581, Ah026297, Ah026313, Ah030550, Ah030551, Ah030554, Ah030555, Ah030740, Ah030741, Ah030742, Ah030964, Ah030965, Ah030966, Ah031041, Ah031059, Ah031103, Ah031223, Ah032137, Ah032141, Ah032142, Ah032218, Ah032219, Ah033207, Ah033609, Ah034022, Ah034023, Ah034024, Ah034242, Ah034366, Ah036289, Ah036290, Ah036291, Ah036343, Ah036344, Ah036400, Ah036401, Ah036819, Ah037804, Ah037805, Ah037918, Ah037919
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.7AG0012940
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.