Basic Information
Locus ID:
Ah006924
Species & Taxonomic ID:
Atriplex hortensis & 34272
Genome Assembly:
Atriplex hortensis v2.0
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Scaffold_579_HRSCAF_742 | 37190845 | 37191703 | - | Ah006924 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 23,166.00 Da | 36.77 | 75.12 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 203 | 2.5E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 204 | 8.45E-41 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 137 | 3.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 205 | 3.1E-17 | - |
| SMART | SM00219 | tyrkin_6 | 61 | 205 | 1.4E-5 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 205 | 22.068134 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_021740319.1 | probable receptor-like protein kinase At2g23200 [Chenopodium quinoa] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LUW7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51577, Sbi_jg51578 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020759 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G08520 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2172, Ceq01G2211 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2412, Cgl01G2458 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g04300 |
| Hydrocharitaceae | Thalassia testudinum | 32 | gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250360 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58004 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830 |
| Zosteraceae | Zostera marina | 2 | Zosma04g11040.v3.1, Zosma06g12330.v3.1 |